GSM1363490: Fermentation 1- NAG 45 min; Saccharopolyspora erythraea; ... - SRA

SRX512205: GSM1363490: Fermentation 1- NAG 45 min; Saccharopolyspora erythraea; RNA-Seq
1 ILLUMINA (Illumina Genome Analyzer IIx) run: 14.8M spots, 3G bases, 1.8Gb downloads

Submitted by: Gene Expression Omnibus (GEO)

Study: Control of chitin and N-acetylglucosamine utilization in Saccharopolyspora erythraea

PRJNA243856 • SRP040996 • All experiments • All runs

show Abstracthide Abstract

We report the effect of addition of N-acetylglucosamine in Saccharopolyspora erythraea reactor cultures on the transcription of genes related to dasR regulon Overall design: Examination of one time-point after 45 minutes of the addition of N-acetylglucosamine in reactor cultures.

Sample: Fermentation 1- NAG 45 min

SAMN02720891 • SRS589576 • All experiments • All runs

Organism: Saccharopolyspora erythraea NRRL 2338

Library:

Instrument: Illumina Genome Analyzer IIx

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: PAIRED

Construction protocol: Total RNA was extracted using two cycles of cellular lysis in Rnase-free zirconia beads, followed by column purifications using Qiagen RNAeasy. Libraries were prepared using DSN treatment, following of mRNA enrichment using MicrobExpress (Ambion)

Experiment attributes:

GEO Accession: GSM1363490

Links:

External link: GEO Sample GSM1363490

NCBI link: NCBI Entrez (gds)

Runs: 1 run, 14.8M spots, 3G bases, 1.8Gb

Run	# of Spots	# of Bases	Size	Published
SRR1220136	14,831,203	3G	1.8Gb	2014-04-15

ID:: 711698

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